NetBenchmark: a bioconductor package for reproducible benchmarks of gene regulatory network inference-Reference-Cited by-同舟云学术

登录注册会员服务联系我们

NetBenchmark: a bioconductor package for reproducible benchmarks of gene regulatory network inference

Published:2015-09-29 Issue:1 Volume:16 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Bellot Pau,Olsen Catharina,Salembier Philippe,Oliveras-Vergés Albert,Meyer Patrick E.

Funder

Ministerio de Educación, Cultura y Deporte (ES)

Innoviris (BE)

Ministerio de Economía y Competitividad (ES)

Université de Liège (BE)

Fonds De La Recherche Scientifique - FNRS (BE)

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/s12859-015-0728-4.pdf

Reference35 articles.

1. Van den Bulcke T, Van Leemput K, Naudts B, van Remortel P, Ma H, Verschoren A, et al. Syntren: a generator of synthetic gene expression data for design and analysis of structure learning algorithms. BMC Bioinformatics. 2006; 7(1):43.

2. Altay G, Emmert-Streib F. Revealing differences in gene network inference algorithms on the network level by ensemble methods. Bioinformatics. 2010; 26(14):1738–44.

3. Schaffter T, Marbach D, Floreano D. Genenetweaver: in silico benchmark generation and performance profiling of network inference methods. Bioinformatics. 2011; 27(16):2263–70.

4. Marbach D, Costello JC, Küffner R, Vega NM, Prill RJ, Camacho DM, et al. Wisdom of crowds for robust gene network inference. Nat Methods. 2012; 9(8):796–804.

5. Maetschke SR, Madhamshettiwar PB, Davis MJ, Ragan MA. Supervised, semi-supervised and unsupervised inference of gene regulatory networks. Briefings Bioinformatics. 2014; 15(2):195–211.

Cited by 41 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Polyploidy and the evolution of phenotypic integration: Network analysis reveals relationships among anatomy, morphology, and physiology;Applications in Plant Sciences;2024-07

2. From time-series transcriptomics to gene regulatory networks: A review on inference methods;PLOS Computational Biology;2023-08-10

3. MCPNet: a parallel maximum capacity-based genome-scale gene network construction framework;Bioinformatics;2023-06-01

4. Improving gene regulatory network inference and assessment: The importance of using network structure;Frontiers in Genetics;2023-02-27

5. Improving gene regulatory network inference and assessment: The importance of using network structure;2023-01-15

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号京ICP备18003416号-3