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Unboxing cluster heatmaps

Published:2017-02 Issue:S2 Volume:18 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Engle Sophie,Whalen Sean,Joshi Alark,Pollard Katherine S.

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/s12859-016-1442-6.pdf

Reference66 articles.

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2. Weinstein JN. A postgenomic visual icon. Science. 2008; 319(5871):1772–3. doi: http://dx.doi.org/10.1126/science.1151888 .

3. Ram O, Goren A, Amit I, Shoresh N, Yosef N, Ernst J, Kellis M, Gymrek M, Issner R, Coyne M, Durham T, Zhang X, Donaghey J, Epstein CB, Regev A, Bernstein BE. Combinatorial patterning of chromatin regulators uncovered by genome-wide location analysis in human cells. Cell. 2011; 147(7):1628–39. doi: http://dx.doi.org/10.1016/j.cell.2011.09.057 .

4. Hoffman MM, Buske OJ, Wang J, Weng Z, Bilmes JA, Noble WS. Unsupervised pattern discovery in human chromatin structure through genomic segmentation. Nat Methods. 2012; 9(5):473–6. doi: http://dx.doi.org/10.1038/nmeth.1937 .

5. Kim N, Park H, He N, Lee HY, Yoon S. QCanvas: An advanced tool for data clustering and visualization of genomics data. Genomics Informat. 2012; 10(4):263–5. doi: http://dx.doi.org/10.5808/GI.2012.10.4.263 .

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