UNIPred-Web: a web tool for the integration and visualization of biomolecular networks for protein function prediction-Reference-Cited by-同舟云学术

UNIPred-Web: a web tool for the integration and visualization of biomolecular networks for protein function prediction

Published:2019-08-14 Issue:1 Volume:20 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Perlasca Paolo,Frasca Marco^ORCID,Ba Cheick Tidiane,Notaro Marco,Petrini Alessandro,Casiraghi Elena,Grossi Giuliano,Gliozzo Jessica,Valentini Giorgio,Mesiti Marco

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/s12859-019-2959-2.pdf

Reference42 articles.

1. Radivojac P, et al. A large-scale evaluation of computational protein function prediction. Nat Methods. 2013; 10(3):221–7.

2. Jiang Y, et al. An expanded evaluation of protein function prediction methods shows an improvement in accuracy. Genome Biol. 2016;17(184). https://doi.org/10.1093/database/bav003 .

3. Mesiti M, Jiménez-Ruiz E, Sanz I, Berlanga-Llavori R, Perlasca P, Valentini G, Manset D. Xml-based approaches for the integration of heterogeneous bio-molecular data. BMC Bioinformatics. 2009; 10(SUPPL. 12):7. https://doi.org/10.1186/1471-2105-10-S12-S7 .

4. Frasca M, Bertoni A, Valentini G. UNIPred: Unbalance-aware Network Integration and Prediction of Protein Functions. J Comput Biol. 2015; 22(12):1057–74. https://doi.org/10.1089/cmb.2014.0110 .

5. Gene Ontology Consortium. Gene Ontology annotations and resources. Nucleic Acids Res. 2013; 41:530–5.

Cited by 9 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. A systematic review of state-of-the-art strategies for machine learning-based protein function prediction;Computers in Biology and Medicine;2023-03

2. Indexing Structures for the Efficient Multi-Resolution Visualization of Big Graphs;IEEE Access;2023

3. Integration and Visual Analysis of Biomolecular Networks Through UNIPred-Web;Communications in Computer and Information Science;2023

4. Heterogeneous data integration methods for patient similarity networks;Briefings in Bioinformatics;2022-06-13

5. ProteoMill: efficient network-based functional analysis portal for proteomics data;Bioinformatics;2021-05-12