MutScan: fast detection and visualization of target mutations by scanning FASTQ data-Reference-Cited by-同舟云学术

登录注册会员服务联系我们

MutScan: fast detection and visualization of target mutations by scanning FASTQ data

Published:2018-01-22 Issue:1 Volume:19 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Chen Shifu,Huang Tanxiao,Wen Tiexiang,Li Hong,Xu Mingyan,Gu Jia

Funder

National Natural Science Foundation of China

The national 863 Program of China

Technology Development and Creative Design Program of Nanshan Shenzhen

Special Funds for Future Industries of Shenzhen

SZSTI Entrepreneurship Funds of Shenzhen

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/s12859-018-2024-6.pdf

Reference23 articles.

1. Bratman SV, et al. Potential clinical utility of ultrasensitive circulating tumor DNA detection with CAPP-Seq. Expert Rev Mol Diagn. 2015;15(6):715–9.

2. Wu K, et al. Personalized targeted therapy for lung cancer. Int J Mol Sci. 2012;13(9):11471–96.

3. Bettegowda C, et al. Detection of circulating tumor DNA in early- and late-stage human malignancies. Sci Transl Med. 2014;6(224):224ra24.

4. Newman AM, et al. An ultrasensitive method for quantitating circulating tumor DNA with broad patient coverage. Nat Med. 2014;20(5):548–54.

5. Chen S, et al. AfterQC: automatic filtering, trimming, error removing and quality control for FASTQ data. BMC Bioinformatics. 2017;18(Suppl 3):80. 91-100

Cited by 16 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Integrative genomics identifies SHPRH as a tumor suppressor gene in lung adenocarcinoma that regulates DNA damage response;British Journal of Cancer;2024-06-18

2. Standardizing digital biobanks: integrating imaging, genomic, and clinical data for precision medicine;Journal of Translational Medicine;2024-02-05

3. Development, Evaluation, and Implementation of a House-Made Targeted Next-Generation Sequencing Spoligotyping in a French Laboratory;International Journal of Molecular Sciences;2022-09-25

4. CleanSeq: A Pipeline for Contamination Detection, Cleanup, and Mutation Verifications from Microbial Genome Sequencing Data;Applied Sciences;2022-06-18

5. Hepatobiliary Tumor Organoids Reveal HLA Class I Neoantigen Landscape and Antitumoral Activity of Neoantigen Peptide Enhanced with Immune Checkpoint Inhibitors;Advanced Science;2022-06-05

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号京ICP备18003416号-3