A decision analysis model for KEGG pathway analysis-Reference-Cited by-同舟云学术

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A decision analysis model for KEGG pathway analysis

Published:2016-10-06 Issue:1 Volume:17 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Du Junli,Li Manlin,Yuan Zhifa,Guo Mancai,Song Jiuzhou,Xie Xiaozhen,Chen Yulin

Funder

Chinese Universities Scientific Fund

National Natural Science Foundation of China

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/s12859-016-1285-1.pdf

Reference40 articles.

1. Glazko GV, Emmert-Streib F. Unite and conquer: univariate and multivariate approaches for finding differentially expressed gene sets. Bioinformatics. 2009;25:2348–54. PMID: 19574285.

2. Khatri P, Sirota M, Butte AJ. Ten years of pathway analysis: current approaches and outstanding challenges. PLoS Comput Biol. 2012;8(2):e1002375. PMID: 22383865.

3. Kanehisa M, Goto S. KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res. 2000;28(1):27–30. PMID: 10592173.

4. Cho RJ, Huang M, Campbell MJ, Dong H, Steinmetz L, Sapinoso L, Hampton G, Elledge SJ, Davis RW, Lockhart DJ. Transcriptional regulation and function during the human cell cycle. Nat Genet. 2001;27(1):48–54. PMID: 11137997.

5. Khatri P, Draghici S, Ostermeier GC, Krawetz SA. Profiling gene expression using Onto-Express. Genomics. 2002;79(2):266–70. PMID:11829497.

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