MCtandem: an efficient tool for large-scale peptide identification on many integrated core (MIC) architecture
Author:
Publisher
Springer Science and Business Media LLC
Subject
Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology
Link
http://link.springer.com/content/pdf/10.1186/s12859-019-2980-5.pdf
Reference44 articles.
1. Craig R, Beavis RC. Tandem: matching proteins with tandem mass spectra. Bioinformatics. 2004; 20(9):1466–7.
2. Eng JK, McCormack AL, Yates JR. An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database. J Am Soc Mass Spectrom. 1994; 5(11):976–89.
3. Perkins DN, Pappin DJ, Creasy DM, Cottrell JS. Probability-based protein identification by searching sequence databases using mass spectrometry data. ELECTROPHORESIS: Int J. 1999; 20(18):3551–67.
4. Li D, Fu Y, Sun R, Ling CX, Wei Y, Zhou H, Zeng R, Yang Q, He S, Gao W. pfind: a novel database-searching software system for automated peptide and protein identification via tandem mass spectrometry. Bioinformatics. 2005; 21(13):3049–50.
5. Wang L-h, Li D-Q, Fu Y, Wang H-P, Zhang J-F, Yuan Z-F, Sun R-X, Zeng R, He S-M, Gao W. pfind 2.0: a software package for peptide and protein identification via tandem mass spectrometry. Rapid Commun Mass Spectrom. 2007; 21(18):2985–91.
Cited by 10 articles. 订阅此论文施引文献 订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献
1. Locality-sensitive hashing enables efficient and scalable signal classification in high-throughput mass spectrometry raw data;BMC Bioinformatics;2022-07-20
2. Communication lower-bounds for distributed-memory computations for mass spectrometry based omics data;Journal of Parallel and Distributed Computing;2022-03
3. Existing HPC Methods and the Communication Lower Bounds for Distributed-Memory Computations for Mass Spectrometry-Based Omics Data;Computational Biology;2022
4. High-Performance Computing Strategy Using Distributed-Memory Supercomputers;Computational Biology;2022
5. Need for High-Performance Computing for MS-Based Omics Data Analysis;Computational Biology;2022
1.学者识别学者识别
2.学术分析学术分析
3.人才评估人才评估
"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811{复制后删除}0370
www.globalauthorid.com
TOP
Copyright © 2019-2024 北京同舟云网络信息技术有限公司 京公网安备11010802033243号 京ICP备18003416号-3