Aligning the unalignable: bacteriophage whole genome alignments-Reference-Cited by-同舟云学术

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Aligning the unalignable: bacteriophage whole genome alignments

Published:2016-01-13 Issue:1 Volume:17 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Bérard Sèverine,Chateau Annie,Pompidor Nicolas,Guertin Paul,Bergeron Anne,Swenson Krister M.

Funder

Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada

European Research Council

Agence Nationale de la Recherche

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/s12859-015-0869-5

Reference23 articles.

1. Hatfull GF, Jacobs-Sera D, Lawrence JG, Pope WH, Russell DA, Ko CC, et al. Comparative genomic analysis of 60 Mycobacteriophage genomes: genome clustering, gene acquisition, and gene size. J Mol Biol. 2010; 397(1):119–43.

2. Grose JH, Jensen GL, Burnett SH, Breakwell DP. Genomic comparison of 93 Bacillus phages reveals 12 clusters, 14 singletons and remarkable diversity. BMC Genomics. 2014; 15:855.

3. Grose JH, Casjens SR. Understanding the enormous diversity of bacteriophages: the tailed phages that infect the bacterial family Enterobacteriaceae. Virology. 2014; 468–470:421–43.

4. Kehr B, Trappe K, Holtgrewe M, Reinert K. Genome alignment with graph data structures: a comparison. BMC Bioinforma. 2014; 15:99.

5. Botstein D. A theory of modular evolution for bacteriophages. Ann N Y Acad Sci. 1980; 354:484–90.

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