Imputation in families using a heuristic phasing approach-Reference-Cited by-同舟云学术

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Imputation in families using a heuristic phasing approach

Published:2014-06 Issue:S1 Volume:8 Page:
ISSN:1753-6561
Container-title:BMC Proceedings
language:en
Short-container-title:BMC Proc

Author:

Blackburn August N,Dean Angela K,Lehman Donna M

Publisher

Springer Science and Business Media LLC

Subject

General Biochemistry, Genetics and Molecular Biology,General Medicine

Link

https://link.springer.com/content/pdf/10.1186/1753-6561-8-S1-S16.pdf

Reference11 articles.

1. Howie B, Fuchsberger C, Stephens M, Marchini J, Abecasis GR: Fast and accurate genotype imputation in genome-wide association studies through pre-phasing. Nat Genet. 2012, 44: 955-959. 10.1038/ng.2354.

2. Abecasis GR, Cherny SS, Cookson WO, Cardon LR: Merlin--rapid analysis of dense genetic maps using sparse gene flow trees. Nat Genet. 2002, 30: 97-101. 10.1038/ng786.

3. Chen GK, Wang K, Stram AH, Sobel EM, Lange K: Mendel-GPU: haplotyping and genotype imputation on graphics processing units. Bioinformatics. 2012, 28: 2979-2980. 10.1093/bioinformatics/bts536.

4. Wijsman EM, Rothstein JH, Thompson EA: Multipoint linkage analysis with many multiallelic or dense diallelic markers: Markov chain-Monte Carlo provides practical approaches for genome scans on general pedigrees. Am J Hum Genet. 2006, 79: 846-858. 10.1086/508472.

5. Danecek P, Auton A, Abecasis G, Albers CA, Banks E, DePristo MA, Handsaker RE, Lunter G, Marth GT, Sherry ST, et al: The variant call format and VCFtools. Bioinformatics. 2011, 27: 2156-2158. 10.1093/bioinformatics/btr330.

Cited by 3 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Mendelian Inconsistent Signatures from 1314 Ancestrally Diverse Family Trios Distinguish Biological Variation from Sequencing Error;Journal of Computational Biology;2019-05

2. Mendelian inheritance errors in whole genome sequenced trios are enriched in repeats and cluster within copy number losses;2017-12-28

3. Value of Mendelian Laws of Segregation in Families: Data Quality Control, Imputation, and Beyond;Genetic Epidemiology;2014-08-11

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