Critical comparison of sample preparation strategies for shotgun proteomic analysis of formalin-fixed, paraffin-embedded samples: insights from liver tissue-Reference-Cited by-同舟云学术

Critical comparison of sample preparation strategies for shotgun proteomic analysis of formalin-fixed, paraffin-embedded samples: insights from liver tissue

Published:2014-07-08 Issue:1 Volume:11 Page:
ISSN:1542-6416
Container-title:Clinical Proteomics
language:en
Short-container-title:Clin Proteom

Author:

Tanca Alessandro,Abbondio Marcello,Pisanu Salvatore,Pagnozzi Daniela,Uzzau Sergio,Addis Maria Filippa

Publisher

Springer Science and Business Media LLC

Subject

Clinical Biochemistry,Molecular Biology,Molecular Medicine,Clinical Biochemistry,Molecular Biology,Molecular Medicine

Link

https://link.springer.com/content/pdf/10.1186/1559-0275-11-28.pdf

Reference51 articles.

1. Nirmalan N, Banks R, Van Eyk JE: Proteomic analysis of formalin fixed tissue. Proteomics Clin Appl. 2013, 7: 215-216.

2. Blonder J, Veenstra TD: Clinical proteomic applications of formalin-fixed paraffin-embedded tissues. Clin Lab Med. 2009, 29: 101-113.

3. Tanca A, Pagnozzi D, Addis MF: Setting proteins free: Progresses and achievements in proteomics of formalin-fixed, paraffin-embedded tissues. Proteomics Clin Appl. 2012, 6: 7-21.

4. Addis MF, Tanca A, Pagnozzi D, Rocca S, Uzzau S: 2-D PAGE and MS analysis of proteins from formalin-fixed, paraffin-embedded tissues. Proteomics. 2009, 9: 4329-4339.

5. Tanca A, Pagnozzi D, Burrai GP, Polinas M, Uzzau S, Antuofermo E, Addis MF: Comparability of differential proteomics data generated from paired archival fresh-frozen and formalin-fixed samples by GeLC-MS/MS and spectral counting. J Proteomics. 2012, 77: 561-576.

Cited by 50 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Quantitative Comparison of Deparaffinization, Rehydration, and Extraction Methods for FFPE Tissue Proteomics and Phosphoproteomics;Analytical Chemistry;2024-08-05

2. Lysis buffer selection guidance for mass spectrometry-based global proteomics including studies on the intersection of signal transduction and metabolism;2024-02-21

3. Protein Signatures for Distinguishing Colorectal Cancer Liver Metastases from Primary Liver Cancer Using Tissue Slide Proteomics;Frontiers in Bioscience-Landmark;2024-01-09

4. Global Protein Profiling in Processed Immunohistochemistry Tissue Sections;International Journal of Molecular Sciences;2023-07-11

5. Systematic evaluation and optimization of protein extraction parameters in diagnostic FFPE specimens;Clinical Proteomics;2022-05-02