Identifying mixed Mycobacterium tuberculosis infections from whole genome sequence data-Reference-Cited by-同舟云学术

Identifying mixed Mycobacterium tuberculosis infections from whole genome sequence data

Published:2018-08-14 Issue:1 Volume:19 Page:
ISSN:1471-2164
Container-title:BMC Genomics
language:en
Short-container-title:BMC Genomics

Author:

Sobkowiak Benjamin^ORCID,Glynn Judith R.,Houben Rein M. G. J.,Mallard Kim,Phelan Jody E.,Guerra-Assunção José Afonso,Banda Louis,Mzembe Themba,Viveiros Miguel,McNerney Ruth,Parkhill Julian,Crampin Amelia C.,Clark Taane G.

Funder

Medical Research Council

Wellcome Trust

Fundação para a Ciência e a Tecnologia

Publisher

Springer Science and Business Media LLC

Subject

Genetics,Biotechnology

Link

http://link.springer.com/content/pdf/10.1186/s12864-018-4988-z.pdf

Reference37 articles.

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2. Holt KE, Thieu Nga TV, Thanh DP, Vinh H, Kim DW, Vu Tra MP, et al. Tracking the establishment of local endemic populations of an emergent enteric pathogen. Proc Natl Acad Sci U S A. 2013;110:17522–7. https://doi.org/10.1073/pnas.1308632110 .

3. Holden MTG, Hsu L, Kurt K, Weinert L a, Mather AE, Harris SR, et al. A genomic portrait of the emergences, evolution, and global spread of methicillin-resistant Staphylococcus aureus. Genome Res. 2013;23:653–64.

4. Cohen T, van Helden PD, Wilson D, Colijn C, McLaughlin MM, Abubakar I, et al. Mixed-strain Mycobacterium tuberculosis infections and the implications for tuberculosis treatment and control. Clin Microbiol Rev. 2012;25:708–19.

5. Eyre DW, Cule ML, Griffiths D, Crook DW, Peto TEA, Walker AS, et al. Detection of mixed infection from bacterial whole genome sequence data allows assessment of its role in Clostridium difficile transmission. PLoS Comput Biol. 2013;9(5):e1003059.

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