Phylogeny analysis from gene-order data with massive duplications

Author:

Zhou Lingxi,Lin Yu,Feng Bing,Zhao Jieyi,Tang Jijun

Publisher

Springer Science and Business Media LLC

Subject

Genetics,Biotechnology

Reference33 articles.

1. Felsenstein J, Felenstein J. Inferring phylogenies. Sunderland: Sinauer Associates; 2004.

2. Fertin G. Combinatorics of genome rearrangements. Cambridge: MIT press; 2009.

3. Bader D, Moret B, Warnow T, Wyman S, Yan M. GRAPPA (Genome Rearrangements Analysis under Parsimony and other Phylogenetic Algorithms). www.cs.unm.edu/~moret/GRAPPA/ .

4. Bourque G, Pevzner PA. Genome-scale evolution: reconstructing gene orders in the ancestral species. Genome Res. 2002; 12(1):26–36.

5. Cosner M, Jansen R, Moret B, Raubeson L, Wang L, Warnow T, et al. A new fast heuristic for computing the breakpoint phylogeny and a phylogenetic analysis of a group of highly rearranged chloroplast genomes. In: Proceedings of the 8th International Conference on Intelligent Systems for Molecular Biology. San Diego: 2000. p. 104–15.

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