Assembly of chloroplast genomes with long- and short-read data: a comparison of approaches using Eucalyptus pauciflora as a test case
Author:
Funder
Australian Research Council Future Fellowship
Publisher
Springer Science and Business Media LLC
Subject
Genetics,Biotechnology
Link
http://link.springer.com/content/pdf/10.1186/s12864-018-5348-8.pdf
Reference93 articles.
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3. Parks M, Cronn R, Liston A. Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes. BMC Biol. 2009;7:84.
4. Kane N, Sveinsson S, Dempewolf H, Yang JY, Zhang D, Engels JM, et al. Ultra-barcoding in cacao (Theobroma spp.; Malvaceae) using whole chloroplast genomes and nuclear ribosomal DNA. Am J Bot. 2012;99(2):320–9.
5. Bayly MJ, Rigault P, Spokevicius A, Ladiges PY, Ades PK, Anderson C, et al. Chloroplast genome analysis of Australian eucalypts--Eucalyptus, Corymbia, angophora, Allosyncarpia and Stockwellia (Myrtaceae). Mol Phylogenet Evol. 2013;69(3):704–16.
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