An integrated analysis tool for analyzing hybridization intensities and genotypes using new-generation population-optimized human arrays-Reference-Cited by-同舟云学术

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An integrated analysis tool for analyzing hybridization intensities and genotypes using new-generation population-optimized human arrays

Published:2016-03-31 Issue:1 Volume:17 Page:
ISSN:1471-2164
Container-title:BMC Genomics
language:en
Short-container-title:BMC Genomics

Author:

Huang Mei-Chu,Chuang Tzu-Po,Chen Chien-Hsiun,Wu Jer-Yuarn,Chen Yuan-Tsong,Li Ling-Hui,Yang Hsin-Chou

Funder

Academia Sinica

Ministry of Science and Technology

Publisher

Springer Science and Business Media LLC

Subject

Genetics,Biotechnology

Link

http://link.springer.com/content/pdf/10.1186/s12864-016-2478-8

Reference108 articles.

1. Carter NP. Methods and strategies for analyzing copy number variation using DNA microarrays. Nat Genet. 2007;39(7 Suppl):S16–21. doi: 10.1038/ng2028 .

2. Schaaf CP, Wiszniewska J, Beaudet AL. Copy number and SNP arrays in clinical diagnostics. Annu Rev Genomics Hum Genet. 2011;12:25–51. doi: 10.1146/annurev-genom-092010-110715 .

3. Peiffer DA, Le JM, Steemers FJ, Chang W, Jenniges T, Garcia F, et al. High-resolution genomic profiling of chromosomal aberrations using Infinium whole-genome genotyping. Genome Res. 2006;16(9):1136–48. doi: 10.1101/gr.5402306 .

4. Yang HC, Huang MC, Li LH, Lin CH, Yu AL, Diccianni MB, et al. MPDA: microarray pooled DNA analyzer. BMC Bioinformatics. 2008;9:196. doi: 10.1186/1471-2105-9-196 .

5. Van Loo P, Nordgard SH, Lingjaerde OC, Russnes HG, Rye IH, Sun W, et al. Allele-specific copy number analysis of tumors. Proc Natl Acad Sci U S A. 2010;107(39):16910–5. doi: 10.1073/pnas.1009843107 .

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