Advancing skeletal health and disease research with single-cell RNA sequencing

Author:

Lin Peng,Gan Yi-Bo,He Jian,Lin Si-En,Xu Jian-Kun,Chang Liang,Zhao Li-Ming,Zhu Jun,Zhang Liang,Huang Sha,Hu Ou,Wang Ying-Bo,Jin Huai-Jian,Li Yang-Yang,Yan Pu-Lin,Chen Lin,Jiang Jian-Xin,Liu Peng

Abstract

AbstractOrthopedic conditions have emerged as global health concerns, impacting approximately 1.7 billion individuals worldwide. However, the limited understanding of the underlying pathological processes at the cellular and molecular level has hindered the development of comprehensive treatment options for these disorders. The advent of single-cell RNA sequencing (scRNA-seq) technology has revolutionized biomedical research by enabling detailed examination of cellular and molecular diversity. Nevertheless, investigating mechanisms at the single-cell level in highly mineralized skeletal tissue poses technical challenges. In this comprehensive review, we present a streamlined approach to obtaining high-quality single cells from skeletal tissue and provide an overview of existing scRNA-seq technologies employed in skeletal studies along with practical bioinformatic analysis pipelines. By utilizing these methodologies, crucial insights into the developmental dynamics, maintenance of homeostasis, and pathological processes involved in spine, joint, bone, muscle, and tendon disorders have been uncovered. Specifically focusing on the joint diseases of degenerative disc disease, osteoarthritis, and rheumatoid arthritis using scRNA-seq has provided novel insights and a more nuanced comprehension. These findings have paved the way for discovering novel therapeutic targets that offer potential benefits to patients suffering from diverse skeletal disorders.

Funder

National Key Research and Development Program of China

National Natural Science Foundation of China

Natural Science Foundation of Chongqing

Postdoctoral Innovative Talent Support Program

Independent Research Project of State Key Laboratory of Trauma and Chemical Poisoning

General Hospital of Western Theater Command Research Project

University Grants Committee, Research Grants Council of Hong Kong, China

Publisher

Springer Science and Business Media LLC

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