YMAP: a pipeline for visualization of copy number variation and loss of heterozygosity in eukaryotic pathogens-Reference-Cited by-同舟云学术

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YMAP: a pipeline for visualization of copy number variation and loss of heterozygosity in eukaryotic pathogens

Published:2014-11 Issue:11 Volume:6 Page:
ISSN:1756-994X
Container-title:Genome Medicine
language:en
Short-container-title:Genome Med

Author:

Abbey Darren A,Funt Jason,Lurie-Weinberger Mor N,Thompson Dawn A,Regev Aviv,Myers Chad L,Berman Judith

Publisher

Springer Science and Business Media LLC

Subject

Genetics (clinical),Genetics,Molecular Biology,Molecular Medicine

Link

http://link.springer.com/content/pdf/10.1186/s13073-014-0100-8.pdf

Reference47 articles.

1. Selmecki A, Forche A, Berman J: Aneuploidy and isochromosome formation in drug-resistant Candida albicans. Science. 2006, 313: 367-370. 10.1126/science.1128242.

2. Selmecki A, Gerami-Nejad M, Paulson C, Forche A, Berman J: An isochromosome confers drug resistance in vivo by amplification of two genes, ERG11 and TAC1. Mol Microbiol. 2008, 68: 624-641. 10.1111/j.1365-2958.2008.06176.x.

3. Kobayashi T, Heck DJ, Nomura M, Horiuchi T: Expansion and contraction of ribosomal DNA repeats in Saccharomyces cerevisiae: requirement of replication fork blocking (Fob1) protein and the role of RNA polymerase I. Genes Dev. 1998, 12: 3821-3830. 10.1101/gad.12.24.3821.

4. Ketel C, Wang HSW, McClellan M, Bouchonville K, Selmecki A, Lahav T, Gerami-Nejad M, Berman J: Neocentromeres form efficiently at multiple possible loci in Candida albicans. PLoS Genet. 2009, 5: e1000400-10.1371/journal.pgen.1000400.

5. Baum M, Sanyal K, Mishra PK, Thaler N, Carbon J: Formation of functional centromeric chromatin is specified epigenetically in Candida albicans. Proc Natl Acad Sci U S A. 2006, 103: 14877-14882. 10.1073/pnas.0606958103.

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