bSiteFinder, an improved protein-binding sites prediction server based on structural alignment: more accurate and less time-consuming-Reference-Cited by-同舟云学术

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bSiteFinder, an improved protein-binding sites prediction server based on structural alignment: more accurate and less time-consuming

Published:2016-07-11 Issue:1 Volume:8 Page:
ISSN:1758-2946
Container-title:Journal of Cheminformatics
language:en
Short-container-title:J Cheminform

Author:

Gao Jun,Zhang Qingchen,Liu Min,Zhu Lixin,Wu Dingfeng,Cao Zhiwei,Zhu Ruixin

Funder

National Natural Science Foundation of China

The Fundamental Research Funds for the Central Universities

Publisher

Springer Science and Business Media LLC

Subject

Library and Information Sciences,Computer Graphics and Computer-Aided Design,Physical and Theoretical Chemistry,Computer Science Applications

Link

http://link.springer.com/content/pdf/10.1186/s13321-016-0149-z.pdf

Reference32 articles.

1. Greer J, Erickson JW, Baldwin JJ, Varney MD (1994) Application of the three-dimensional structures of protein target molecules in structure-based drug design. J Med Chem 37(8):1035–1054

2. Fuller JC, Burgoyne NJ, Jackson RM (2009) Predicting druggable binding sites at the protein-protein interface. Drug Discov Today 14(3–4):155–161

3. Mandal S, Moudgil M, Mandal SK (2009) Rational drug design. Eur J Pharmacol 625(1–3):90–100

4. Rausell A, Juan D, Pazos F, Valencia A (2010) Protein interactions and ligand binding: from protein subfamilies to functional specificity. Proc Natl Acad Sci USA 107(5):1995–2000

5. Laurie ATR, Jackson RM (2006) Methods for the prediction of protein-ligand binding sites for structure-based drug design and virtual ligand screening. Curr Protein Pept Sci 7(5):395–406

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