Virmid: accurate detection of somatic mutations with sample impurity inference-Reference-Cited by-同舟云学术

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Virmid: accurate detection of somatic mutations with sample impurity inference

Published:2013 Issue:8 Volume:14 Page:R90
ISSN:1465-6906
Container-title:Genome Biology
language:en
Short-container-title:Genome Biol

Author:

Kim Sangwoo,Jeong Kyowon,Bhutani Kunal,Lee Jeong,Patel Anand,Scott Eric,Nam Hojung,Lee Hayan,Gleeson Joseph G,Bafna Vineet

Publisher

Springer Science and Business Media LLC

Reference29 articles.

1. The Sequence Alignment/Map format and SAMtools

2. SNVMix: predicting single nucleotide variants from next-generation sequencing of tumors

3. A framework for variation discovery and genotyping using next-generation DNA sequencing data

4. VarScan: variant detection in massively parallel sequencing of individual and pooled samples

5. SomaticSniper: identification of somatic point mutations in whole genome sequencing data

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