Multi-omic alterations of the SWI/SNF complex define a clinical subgroup in lung adenocarcinoma

Author:

Peinado Paola,Andrades Alvaro,Cuadros Marta,Rodriguez Maria Isabel,Coira Isabel F.,Garcia Daniel J.,Benitez-Cantos Maria S.,Cano Carlos,Zarzuela Eduardo,Muñoz Javier,Loidi Claudia,Saiz Monica,Medina Pedro P.ORCID

Abstract

AbstractSWI/SNF complexes are major targets of mutations in cancer. Here, we combined multiple “-omics” methods to assess SWI/SNF composition and aberrations in LUAD. Mutations in lung SWI/SNF subunits were highly recurrent in our LUAD cohort (41.4%), and over 70% of the mutations were predicted to have functional impact. Furthermore, SWI/SNF expression in LUAD suffered an overall repression that could not be explained exclusively by genetic alterations. Finally, SWI/SNF mutations were associated with poorer overall survival in TCGA-LUAD. We propose SWI/SNF-mutant LUAD as a separate clinical subgroup with practical implications.

Funder

Junta de Andalucía

Universidad de Granada

International Association for the Study of Lung Cancer

Fundación Científica Asociación Española Contra el Cáncer

Ministerio de Economía y Competitividad

Publisher

Springer Science and Business Media LLC

Subject

Genetics (clinical),Developmental Biology,Genetics,Molecular Biology

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