MZPAQ: a FASTQ data compression tool
Author:
Publisher
Springer Science and Business Media LLC
Subject
Information Systems and Management,Health Informatics,Computer Science Applications,Information Systems
Link
http://link.springer.com/content/pdf/10.1186/s13029-019-0073-5.pdf
Reference20 articles.
1. Numanagić I, Bonfield JK, Hach F, Voges J, Ostermann J, Alberti C, Mattavelli M, Sahinalp SC. Comparison of high-throughput sequencing data compression tools. Nat Methods; 12:1005–8. https://doi.org/10.1038/nmeth.4037 .
2. Mohammed MH, Dutta A, Bose T, Chadaram S, Mande SS. DELIMINATE–a fast and efficient method for loss-less compression of genomic sequences: sequence analysis. Bioinformatics (Oxford, England). 2012; 28(19):2527–9. https://doi.org/10.1093/bioinformatics/bts467 .
3. Pinho AJ, Pratas D. Mfcompress: A compression tool for fasta and multi-fasta data. Bioinformatics. 2014; 30(1):117–8. https://doi.org/10.1093/bioinformatics/btt594 .
4. Hosseini M, Pratas D, Pinho A. A Survey on Data Compression Methods for Biological Sequences. Information. 2016; 7(4):56. https://doi.org/10.3390/info7040056 .
5. Hach F, Numanagić I, Alkan C, Sahinalp SC. SCALCE: Boosting sequence compression algorithms using locally consistent encoding. Bioinformatics. 2012; 28(23):3051–7. https://doi.org/10.1093/bioinformatics/bts593 .
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