Recommendations on e-infrastructures for next-generation sequencing-Reference-Cited by-同舟云学术

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Recommendations on e-infrastructures for next-generation sequencing

Published:2016-06-07 Issue:1 Volume:5 Page:
ISSN:2047-217X
Container-title:GigaScience
language:en
Short-container-title:GigaSci

Author:

Spjuth Ola,Bongcam-Rudloff Erik,Dahlberg Johan,Dahlö Martin,Kallio Aleksi,Pireddu Luca,Vezzi Francesco,Korpelainen Eija

Funder

Seventh Framework Programme (BE)

ELIXIR Finland node at CSC - IT Center for Science

Swedish strategic research program eSSENCE

Swedish e-Science Research Centre (SeRC)

Publisher

Oxford University Press (OUP)

Subject

Computer Science Applications,Health Informatics

Link

http://academic.oup.com/gigascience/article-pdf/5/1/1/10843745/13742_2016_Article_132.pdf

Reference34 articles.

1. Wheeler DA, Srinivasan M, Egholm M, Shen Y, Chen L, McGuire A, He W, Chen YJ, Makhijani V, Roth GT, Gomes X, Tartaro K, Niazi F, Turcotte CL, Irzyk GP, Lupski JR, Chinault C, Song X-Z, Liu Y, Yuan Y, Nazareth L, Qin X, Muzny DM, Margulies M, Weinstock GM, Gibbs RA, Rothberg JM. The complete genome of an individual by massively parallel DNA sequencing. Nature. 2008; 452(7189):872–6.

2. Metzker ML. Sequencing technologies – the next generation. Nat Rev Genet. 2010; 11(1):31–46.

3. Yang Y, Muzny DM, Reid JG, Bainbridge MN, Willis A, Ward PA, Braxton A, Beuten J, Xia F, Niu Z, Hardison M, Person R, Bekheirnia MR, Leduc MS, Kirby A, Pham P, Scull J, Wang M, Ding Y, Plon SE, Lupski JR, Beaudet AL, Gibbs RA, Eng CM. Clinical whole-exome sequencing for the diagnosis of mendelian disorders. N Engl J Med. 2013; 369(16):1502–11. doi: 10.1056/NEJMoa1306555 .

4. Lampa S, Dahlö M, Olason PI, Hagberg J, Spjuth O. Lessons learned from implementing a national infrastructure in sweden for storage and analysis of next-generation sequencing data. Gigascience. 2013; 2(1):9. doi: 10.1186/2047-217X-2-9 .

5. Baker M. Next-generation sequencing: adjusting to data overload. Nat Methods. 2010; 7(7):495–9. doi: 10.1038/nmeth0710-495 .

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