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HLA typing from RNA-Seq sequence reads

Published:2012 Issue:12 Volume:4 Page:102
ISSN:1756-994X
Container-title:Genome Medicine
language:en
Short-container-title:Genome Medicine

Author:

Boegel Sebastian,Löwer Martin,Schäfer Michael,Bukur Thomas,de Graaf Jos,Boisguérin Valesca,Türeci Özlem,Diken Mustafa,Castle John C,Sahin Ugur

Publisher

Springer Science and Business Media LLC

Subject

Genetics (clinical),Genetics,Molecular Biology,Molecular Medicine

Reference31 articles.

1. HLA-DR typing by PCR amplification with sequence-specific primers (PCR-SSP) in 2 hours: An alternative to serological DR typing in clinical practice including donor-recipient matching in cadaveric transplantation

2. HLA class II “typing”: Direct sequencing of DRB, DQB, and DQA genes

3. Next-generation sequencing for HLA typing of class I loci

4. High-throughput, high-fidelity HLA genotyping with deep sequencing

5. A novel single cDNA amplicon pyrosequencing method for high-throughput, cost-effective sequence-based HLA class I genotyping

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