16S rRNA gene-based profiling of the human infant gut microbiota is strongly influenced by sample processing and PCR primer choice-Reference-Cited by-同舟云学术

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16S rRNA gene-based profiling of the human infant gut microbiota is strongly influenced by sample processing and PCR primer choice

Published:2015-06-22 Issue:1 Volume:3 Page:
ISSN:2049-2618
Container-title:Microbiome
language:en
Short-container-title:Microbiome

Author:

Walker Alan W.,Martin Jennifer C.,Scott Paul,Parkhill Julian,Flint Harry J.,Scott Karen P.

Publisher

Springer Science and Business Media LLC

Subject

Microbiology (medical),Microbiology

Link

http://link.springer.com/content/pdf/10.1186/s40168-015-0087-4.pdf

Reference58 articles.

1. Mulder IE, Schmidt B, Lewis M, Delday M, Stokes CR, Bailey M, Aminov RI, Gill BP, Pluske JR, Mayer C-D, Kelly D. Restricting microbial exposure in early life negates the immune benefits associated with gut colonization in environments of high microbial diversity. PLoS ONE 2011, 6(12); doi:10.1371/journal.pone.0028279.

2. Russell SL, Gold MJ, Hartmann M, Willing BP, Thorson L, Wlodarska M, et al. Early life antibiotic-driven changes in microbiota enhance susceptibility to allergic asthma. EMBO Rep. 2012;13(5):440–7.

3. Cox L, Yamanishi S, Sohn J, Alekseyenko A, Leung J, Cho I, et al. Altering the intestinal microbiota during a critical developmental window has lasting metabolic consequences. Cell. 2014;158(4):705–21.

4. Vallès Y, Artacho A, Pascual-García A, Ferrús ML, Gosalbes MJ, Abellán JJ, Francino MP. Microbial succession in the gut: directional trends of taxonomic and functional change in a birth cohort of Spanish infants. PLoS Genetics 2014, 10(6); doi:10.1371/journal.pgen.1004406.

5. Stark PL, Lee A. The microbial ecology of the large bowel of breast-fed and formula-fed infants during the first year of life. J Med Microbiol. 1982;15(2):189–203.

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