A novel immune checkpoints-based signature to predict prognosis and response to immunotherapy in lung adenocarcinoma

Author:

Sun Nan,Luo Yuejun,Zheng Bo,Zhang Zhihui,Zhang Chaoqi,Zhang Zhen,Zhang Guochao,Tan Fengwei,Xue Qi,Gao Shugeng,He JieORCID

Abstract

AbstractBackgroundExcept for B7-CD28 family members, more novel immune checkpoints are being discovered. They are closely associated with tumor immune microenvironment and regulate the function of many immune cells. Various cancer therapeutic studies targeting these novel immune checkpoints are currently in full swing. However, studies concerning novel immune checkpoints phenotypes and clinical significance in lung adenocarcinoma (LUAD) are still limited.MethodsWe enrolled 1883 LUAD cases from nine different cohorts. The samples from The Cancer Genome Atlas (TCGA) were used as a training set, whereas seven microarray data cohorts and an independent cohort with 102 qPCR data were used for validation. The immune profiles and potential mechanism of the system were also explored.ResultsAfter univariate Cox proportional hazards regression and stepwise multivariable Cox analysis, a novel immune checkpoints-based system (LTA, CD160, and CD40LG) were identified from the training set, which significantly stratified patients into high- and low-risk groups with different survivals. Furthermore, this system has been well validated in different clinical subgroups and multiple validation cohorts. It also acted as an independent prognostic factor for patients with LAUD in different cohorts. Further exploration suggested that high-risk patients exhibited distinctive immune cells infiltration and suffered an immunosuppressive state. Additionally, this system is closely linked to various classical immunotherapy biomarkers.Conclusionwe constructed a novel immune checkpoints-based system for LUAD, which predicts prognosis and immunotherapeutic implications. We believe that these findings will not only aid in clinical management but will also shed some light on screening appropriate patients for immunotherapy.

Funder

CAMS Innovation Fund for Medical Sciences

National Natural Science Foundation of China

Fundamental Research Funds for the Central Universities

National Key Basic Research Development Plan

Beijing Natural Science Foundation

Beijing Hope Run Special Fund of Cancer Foundation of China

Publisher

Springer Science and Business Media LLC

Subject

General Biochemistry, Genetics and Molecular Biology,General Medicine

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