A deep survey of alternative splicing in grape reveals changes in the splicing machinery related to tissue, stress condition and genotype-Reference-Cited by-同舟云学术

A deep survey of alternative splicing in grape reveals changes in the splicing machinery related to tissue, stress condition and genotype

Published:2014-04-17 Issue:1 Volume:14 Page:
ISSN:1471-2229
Container-title:BMC Plant Biology
language:en
Short-container-title:BMC Plant Biol

Author:

Vitulo Nicola,Forcato Claudio,Carpinelli Elisa Corteggiani,Telatin Andrea,Campagna Davide,D'Angelo Michela,Zimbello Rosanna,Corso Massimiliano,Vannozzi Alessandro,Bonghi Claudio,Lucchin Margherita,Valle Giorgio

Publisher

Springer Science and Business Media LLC

Subject

Plant Science

Link

https://link.springer.com/content/pdf/10.1186/1471-2229-14-99.pdf

Reference68 articles.

1. Jaillon O, Aury J-M, Noel B, Policriti A, Clepet C, Casagrande A, Choisne N, Aubourg S, Vitulo N, Jubin C, Vezzi A, Legeai F, Hugueney P, Dasilva C, Horner D, Mica E, Jublot D, Poulain J, Bruyère C, Billault A, Segurens B, Gouyvenoux M, Ugarte E, Cattonaro F, Anthouard V, Vico V, Del Fabbro C, Alaux M, Di Gaspero G, Dumas V, et al: The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Nature. 2007, 449: 463-467. 10.1038/nature06148.

2. Velasco R, Zharkikh A, Troggio M, Cartwright DA, Cestaro A, Pruss D, Pindo M, Fitzgerald LM, Vezzulli S, Reid J, Malacarne G, Iliev D, Coppola G, Wardell B, Micheletti D, Macalma T, Facci M, Mitchell JT, Perazzolli M, Eldredge G, Gatto P, Oyzerski R, Moretto M, Gutin N, Stefanini M, Chen Y, Segala C, Davenport C, Demattè L, Mraz A, et al: A high quality draft consensus sequence of the genome of a heterozygous grapevine variety. PLoS One. 2007, 2: e1326-10.1371/journal.pone.0001326.

3. Fasoli M, Dal Santo S, Zenoni S, Tornielli GB, Farina L, Zamboni A, Porceddu A, Venturini L, Bicego M, Murino V, Ferrarini A, Delledonne M, Pezzotti M: The grapevine expression atlas reveals a deep transcriptome shift driving the entire plant into a maturation program. Plant Cell. 2012, 24: 3489-3505. 10.1105/tpc.112.100230.

4. Venturini L, Ferrarini A, Zenoni S, Tornielli GB, Fasoli M, Santo SD, Minio A, Buson G, Tononi P, Zago ED, Zamperin G, Bellin D, Pezzotti M, Delledonne M: De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. BMC Genomics. 2013, 14: 41-10.1186/1471-2164-14-41.

5. Zenoni S, Ferrarini A, Giacomelli E, Xumerle L, Fasoli M, Malerba G, Bellin D, Pezzotti M, Delledonne M: Characterization of transcriptional complexity during berry development in Vitis vinifera using RNA-seq. Plant Physiol. 2010, 152: 1787-1795. 10.1104/pp.109.149716.

Cited by 214 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Impact of elevated temperatures on the genetic and morpho-physiological traits of cotton genotypes cultivation;Genetic Resources and Crop Evolution;2024-08-21

2. Grape ripening speed slowed down using natural variation;2024-08-12

3. Comparative Analysis of Alternative Splicing in Moso Bamboo and Its Dwarf Mutant, Phyllostachys edulis ‘Tubaeformis’;Forests;2024-07-15

4. RNA-seq analysis reveals transcriptome reprogramming and alternative splicing during early response to salt stress in tomato root;Frontiers in Plant Science;2024-06-20

5. Biography of Vitis genomics: recent advances and prospective;Horticulture Research;2024-05-07