Author:
Zeeberg Barry R,Feng Weimin,Wang Geoffrey,Wang May D,Fojo Anthony T,Sunshine Margot,Narasimhan Sudarshan,Kane David W,Reinhold William C,Lababidi Samir,Bussey Kimberly J,Riss Joseph,Barrett J Carl,Weinstein John N
Abstract
AbstractWe have developed GoMiner, a program package that organizes lists of 'interesting' genes (for example, under- and overexpressed genes from a microarray experiment) for biological interpretation in the context of the Gene Ontology. GoMiner provides quantitative and statistical output files and two useful visualizations. The first is a tree-like structure analogous to that in the AmiGO browser and the second is a compact, dynamically interactive 'directed acyclic graph'. Genes displayed in GoMiner are linked to major public bioinformatics resources.
Publisher
Springer Science and Business Media LLC
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