Agalma: an automated phylogenomics workflow

Author:

Dunn Casey W,Howison Mark,Zapata Felipe

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Reference31 articles.

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2. Hejnol A, Obst M, Stamatakis A, Ott M, Rouse GW, Edgecombe GD, Martinez P, Baguñà J, Bailly X, Jondelius U, Wiens M, Müller WEG, Seaver E, Wheeler WC, Martindale MQ, Giribet G, Dunn CW: Assessing the root of bilaterian animals with scalable phylogenomic methods. Proc R Soc B. 2009, 276 (1677): 4261-4270. 10.1098/rspb.2009.0896.

3. Smith SA, Wilson NG, Goetz FE, Feehery C, Andrade SCS, Rouse GW, Giribet G, Dunn CW: Resolving the evolutionary relationships of molluscs with phylogenomic tools. Nature. 2011, 480 (7377): 364-367. 10.1038/nature10526.

4. Philippe H, Derelle R, Lopez P, Pick K, Borchiellini C, Boury-Esnault N, Vacelet J, Renard E, Houliston E, QuEinnec E, Da Silva C, Wincker P, Le Guyader H, Leys S, Jackson DJ, Schreiber F, Erpenbeck D, Morgenstern B, WOrheide G, Manuel M: Phylogenomics Revives Traditional Views on Deep Animal Relationships. Curr Biol : CB. 2009, 19 (8): 706-712. 10.1016/j.cub.2009.02.052. [ http://dx.doi.org/10.1016/j.cub.2009.02.052 ],

5. Delsuc F, Brinkmann H, Chourrout D, Philippe H: Tunicates and not cephalochordates are the closest living relatives of vertebrates. Nature. 2006, 439 (7079): 965-968. 10.1038/nature04336. [ http://www.nature.com/doifinder/10.1038/nature04336 ],

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