Unraveling gene regulatory networks from time-resolved gene expression data -- a measures comparison study-Reference-Cited by-同舟云学术

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Unraveling gene regulatory networks from time-resolved gene expression data -- a measures comparison study

Published:2011-07-19 Issue:1 Volume:12 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Hempel Sabrina,Koseska Aneta,Nikoloski Zoran,Kurths Jürgen

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/1471-2105-12-292.pdf

Reference68 articles.

1. Levine M, Tjian R: Transcription regulation and animal diversity. Nature 2003, 424(6945):147–151. 10.1038/nature01763

2. Stolovitzky G, Monroe D, Califano A: Dialogue on Reverse-Engineering Assessment and Methods: The DREAM of High-throughput pathway inference. Annals of the New York Academy of Sciences 2007, 1115: 1–22. 10.1196/annals.1407.021

3. Albert R, Othmer HG: The topology of the regulatory interactions predicts the expression pattern of the segment polarity genes in Drosophila melanogaster. Journal of Theoretical Biology 2003, 223: 1–18. 10.1016/S0022-5193(03)00035-3

4. Ronen M, Rosenberg R, Shraiman BI, Alon U: Assigning numbers to the arrows: parameterizing a gene regulation network by using accurate expression kinetics. PNAS 2002, 99(16):10555–10560. 10.1073/pnas.152046799

5. Luscombe NM, Babu MM, Yu H, Snyder M, Teichmann SA, Gerstein M: Genomic analysis of regulatory network dynamics reveals large topological changes. Nature 2004, 431(7006):308–312. 10.1038/nature02782

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