Progressive multiple sequence alignments from triplets-Reference-Cited by-同舟云学术

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Progressive multiple sequence alignments from triplets

Published:2007-07-15 Issue:1 Volume:8 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Kruspe Matthias,Stadler Peter F

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/1471-2105-8-254.pdf

Reference45 articles.

1. The aln3nn software. [ http://www.bioinf.uni-leipzig.de/Software/aln3nn ]

2. Wang L, Jiang T: On the Complexity of Multiple Sequence Alignment. J Comp Biol 1994, 1: 337–348.

3. Thompson J, Higgins D, Gibson T: CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 1994, 22(22):4673–4680. 10.1093/nar/22.22.4673

4. Hogeweg P, Hesper B: The alignment of sets of sequences and the construction of phylogenetic trees. An integrated method. J Mol Evol 1984, 20: 175–186. 10.1007/BF02257378

5. Feng D, Doolittle R: Progressive sequence alignment as a prerequisite to correct phylogenetic trees. J Mol Evol 1987, 25: 351–360. 10.1007/BF02603120

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