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Denoising PCR-amplified metagenome data

Published:2012-10-31 Issue:1 Volume:13 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Rosen Michael J,Callahan Benjamin J,Fisher Daniel S,Holmes Susan P

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/1471-2105-13-283.pdf

Reference25 articles.

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2. Iwai S, Chai B, Sul WJ, Cole JR, Hashsham SA, Tiedje JM: Gene-targeted-metagenomics reveals extensive diversity of aromatic dioxygenase genes in the environment. ISME J 2010, 4: 279–285. 10.1038/ismej.2009.104

3. Teixeria LCRS, Peixoto RS, Cury JC, Sul WJ, Pellizari VH, Tiedje J, Rosado AS: Bacterial diversity in rhizosphere soil from Antarctic vascular plants of Admiralty Bay, maritime Antarctica. ISME J 2010, 4: 989–1001. 10.1038/ismej.2010.35

4. Huse SM, Dethlefsen L, Huber JA, Welch DM, Relman DA, Sogin ML: Exploring microbial diversity and taxonomy using SSU rRNA hypervariable tag sequencing. PLoS Genet 2008, 4: e1000255. 10.1371/journal.pgen.1000255

5. Wilmes P, Simmons SL, Denef VJ, Banfield JF: The dynamic genetic repertoire of microbial communities. FEMS Microbiol Rev 2009, 33: 109–132. 10.1111/j.1574-6976.2008.00144.x

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