Protein inter-domain linker prediction using Random Forest and amino acid physiochemical properties

Author:

Shatnawi Maad,Zaki Nazar,Yoo Paul D

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Reference61 articles.

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2. Yoo PD, Sikder AR, Taheri J, Zhou BB, Zomaya AY: Domnet: protein domain boundary prediction using enhanced general regression network and new profiles. NanoBioscience, IEEE Transactions. 2008, 7 (2): 172-181.

3. Suyama M, Ohara O: Domcut: prediction of inter-domain linker regions in amino acid sequences. Bioinformatics. 2003, 19 (5): 673-674. 10.1093/bioinformatics/btg031.

4. Bhaskara RM, de Brevern AG, Srinivasan N: Understanding the role of domain-domain linkers in the spatial orientation of domains in multi-domain proteins. Journal of Biomolecular Structure and Dynamics. 2012,

5. Zaki N: Prediction of protein-protein interactions using pairwise alignment and inter-domain linker region. Engineering Letters. 2008, 16 (4): 505-

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