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A conformal Bayesian network for classification of Mycobacterium tuberculosis complex lineages

  • Published:2010-04 Issue:S3 Volume:11 Page:
  • ISSN:1471-2105
  • Container-title:BMC Bioinformatics
  • language:en
  • Short-container-title:BMC Bioinformatics

Author:

Aminian Minoo,Shabbeer Amina,Bennett Kristin P

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Reference18 articles.

1. Kamerbeek J, Schouls L, Kolk A, vanAgterveld M, vanSoolingen D, Kuijper S, Bunschoten A, Molhuizen H, Shaw R, Goyal M, et al.: Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology. J Clin Microbiol 1997, 35(4):907–914.

2. Supply P, Allix C, Lesjean S, Cardoso-Oelemann M, Rusch-Gerdes S, Willery E, Savine E, de Haas P, van Deutekom H, Roring S, et al.: Proposal for standardization of optimized mycobacterial interspersed repetitive unit-variable-number tandem repeat typing of Mycobacterium tuberculosis. J Clin Microbiol 2006, 44(12):4498–4510. 10.1128/JCM.01392-06

3. Hirsh AE, Tsolaki AG, DeRiemer K, Feldman MW, Small PM: Stable association between strains of Mycobacterium tuberculosis and their human host populations. P Natl Acad Sci USA 2004, 101(14):4871–4876. 10.1073/pnas.0305627101

4. Ferdinand S, Valetudie G, Sola C, Rastogi N: Data mining of Mycobacterium tuberculosis complex genotyping results using mycobacterial interspersed repetitive units validates the clonal structure of spoligotyping-defined families. Res Microbiol 2004, 155(8):647–654. 10.1016/j.resmic.2004.04.013

5. Filliol I, Driscoll JR, van Soolingen D, Kreiswirth BN, Kremer K, Valetudie G, Anh DD, Barlow R, Banerjee D, Bifani PJ, et al.: Snapshot of moving and expanding clones of Mycobacterium tuberculosis and their global distribution assessed by spoligotyping in an international study. J Clin Microbiol 2003, 41(5):1963–1970. 10.1128/JCM.41.5.1963-1970.2003
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