ProtQuant: a tool for the label-free quantification of MudPIT proteomics data-Reference-Cited by-同舟云学术

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ProtQuant: a tool for the label-free quantification of MudPIT proteomics data

Published:2007-11-01 Issue:S7 Volume:8 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Bridges Susan M,Magee G Bryce,Wang Nan,Williams W Paul,Burgess Shane C,Nanduri Bindu

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/1471-2105-8-S7-S24.pdf

Reference21 articles.

1. Ong SE, Mann M: Mass spectrometry-based proteomics turns quantitative. Nat Chem Biol 2005,1(5):252–262. 10.1038/nchembio736

2. Washburn MP, Wolters D, Yates JR 3rd: Large-scale analysis of the yeast proteome by multidimensional protein identification technology. Nat Biotechnol 2001,19(3):242–247. 10.1038/85686

3. Eng JK, McCormack AL, Yates JR 3rd: An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database. J Am Soc Mass Spectrom 1994, 5: 976–989. 10.1016/1044-0305(94)80016-2

4. Perkins DN, Pappin DJ, Creasy DM, Cottrell JS: Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis 1999,20(18):3551–3567. 10.1002/(SICI)1522-2683(19991201)20:18<3551::AID-ELPS3551>3.0.CO;2-2

5. Geer LY, Markey SP, Kowalak JA, Wagner L, Xu M, Maynard DM, Yang X, Shi W, Bryant SH: Open mass spectrometry search algorithm. J Proteome Res 2004,3(5):958–964. 10.1021/pr0499491

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