PEAT: an intelligent and efficient paired-end sequencing adapter trimming algorithm-Reference-Cited by-同舟云学术

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PEAT: an intelligent and efficient paired-end sequencing adapter trimming algorithm

Published:2015-01-21 Issue:S1 Volume:16 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Li Yun-Lung,Weng Jui-Cheng,Hsiao Chiung-Chih,Chou Min-Te,Tseng Chin-Wen,Hung Jui-Hung

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

https://link.springer.com/content/pdf/10.1186/1471-2105-16-S1-S2.pdf

Reference26 articles.

1. Fullwood MJaR Y: ChIP-based methods for the identification of long-range chromatin interactions. J Cell Biochem. 2009, 107 (1): 30-39. 10.1002/jcb.22116.

2. Le Hir H: The spliceosome deposits multiple proteins 20-24 nucleotides upstream of mRNA exon-exon junctions. The EMBO Journal. 2000, 19 (24): 6860-6869. 10.1093/emboj/19.24.6860.

3. Paired-End Sequencing | Achieve maximum coverage across the genome. [http://illumina.com]

4. FASTX-Toolkit. [http://hannonlab.cshl.edu]

5. Martin M: Cutadapt removes adapter sequences from high-throughput sequencing reads. EMBnetjournal. 2011, 17 (1): 10-22.

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