Towards a theoretical understanding of false positives in DNA motif finding
Author:
Publisher
Springer Science and Business Media LLC
Subject
Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology
Link
http://link.springer.com/content/pdf/10.1186/1471-2105-13-151.pdf
Reference48 articles.
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3. Moses AM, Sinha S, et al.: Regulatory Motif Analysis. In Bioinformatics: Tools and Applications. Edited by: Edwards D. Springer Science + Business Media LLC, ; 2009:137–163.
4. Tompa M, Li N, Bailey TL, Church GM, De Moor B, Eskin E, Favorov AV, Frith MC, Fu Y, Kent WJ, Makeev VJ, Mironov AA, Noble WS, Pavesi G, Pesole G, Régnier M, Simonis N, Sinha S, Thijs G, van Helden J, Vandenbogaert M, Weng Z, Workman C, Ye C, Zhu Z: Assessing computational tools for the discovery of transcription factor binding sites. Nat Biotechnol 2005, 23(1):137–144. 10.1038/nbt1053
5. Sandve GK, Abul O, Walseng V, Drabløs F: Improved benchmarks for computational motif discovery. BMC Bioinforma 2007, 8: 193. 10.1186/1471-2105-8-193
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