Computing the protein binding sites
Author:
Publisher
Springer Science and Business Media LLC
Subject
Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology
Link
http://link.springer.com/content/pdf/10.1186/1471-2105-13-S10-S2.pdf
Reference23 articles.
1. Laurie AT, Jackson RM: Q-SiteFinder: an energy-based method for the prediction of protein-ligand binding sites. Bioinformatics. 2005, 21: 1908-1916. 10.1093/bioinformatics/bti315.
2. Bradford JR, Westhead DR: Improved prediction of protein-protein binding sites using a support vector machines approach. Bioinformatics. 2005, 21: 1487-1494. 10.1093/bioinformatics/bti242.
3. Chen YC, Lo YS, Hsu WC, Yang JM: 3D-partner: a web server to infer interacting partners and binding models. Nucleic Acids Res. 2007, 35: W561-W567. 10.1093/nar/gkm346.
4. Lo A, Chiu YY, Rodland EA, Lyu PC, Sung TY, Hsu WL: Predicting helix-helix interactions from residue contacts in membrane proteins. Bioinformatics. 2008, 25: 996-1003.
5. Li H, Li J, Wong L: Discovering motif pairs at interaction sites from protein sequences on a proteomewide scale. Bioinformatics. 2006, 22: 989-996. 10.1093/bioinformatics/btl020.
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