Performing statistical analyses on quantitative data in Taverna workflows: An example using R and maxdBrowse to identify differentially-expressed genes from microarray data-Reference-Cited by-同舟云学术

Performing statistical analyses on quantitative data in Taverna workflows: An example using R and maxdBrowse to identify differentially-expressed genes from microarray data

Published:2008-08-07 Issue:1 Volume:9 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Li Peter,Castrillo Juan I,Velarde Giles,Wassink Ingo,Soiland-Reyes Stian,Owen Stuart,Withers David,Oinn Tom,Pocock Matthew R,Goble Carole A,Oliver Stephen G,Kell Douglas B

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/1471-2105-9-334.pdf

Reference35 articles.

1. Castrillo JI, Zeef LA, Hoyle DC, Zhang N, Hayes A, Gardner DCJ, Cornell MJ, Petty J, Hakes L, Wardleworth L, Rash B, Brown M, Dunn WB, Broadhurst D, O' Donoghue K, Hester SS, Dunkley TPJ, Hart SR, Swainston N, Li P, Gaskell SJ, Paton NW, Lilley KS, Kell DB, Oliver SG: Growth control of the eukaryote cell: A systems biology study in yeast. Journal of Biology 2007, 6: 4.

2. Ishii N, Nakahigashi K, Baba T, Robert M, Soga T, Kanai A, Hirasawa T, Naba M, Hirai K, Hoque A, Ho PY, Kakazu Y, Sugawara K, Igarashi S, Harada S, Masuda T, Sugiyama N, Togashi T, Hasegawa M, Takai Y, Yugi K, Arakawa K, Iwata N, Toya Y, Nakayama Y, Nishioka T, Shimizu K, Mori H, Tomita M: Multiple high-throughput analyses monitor the response of E. coli to perturbations. Science 2007, 316: 593–597.

3. Kell DB, Oliver SG: Here is the evidence, now what is the hypothesis? The complementary roles of inductive and hypothesis-driven science in the post-genomic era. Bioessays 2004, 26: 99–105.

4. Hayes A, Castrillo JI, Oliver SG, Brass A, Zeef LAH: Transcript Analysis: A Microarray Approach. In Methods in Microbiology. Yeast Gene Analysis. Volume 36. Edited by: Stansfield I, Stark MJR. Elsevier; 2007:189–219.

5. MATLAB[ http://www.mathworks.com/products/matlab ]

Cited by 37 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Workflow Design for Implementation of In-silico Experiments with Big Biomedical Data Streams;2023 31st National Conference with International Participation (TELECOM);2023-11-16

2. Big data workflow platforms for science;THERMOPHYSICAL BASIS OF ENERGY TECHNOLOGIES (TBET 2020);2021

3. The role of machine learning in scientific workflows;The International Journal of High Performance Computing Applications;2019-05-30

4. ANIMA: Association network integration for multiscale analysis;Wellcome Open Research;2018-11-14

5. ANIMA: Association network integration for multiscale analysis;Wellcome Open Research;2018-06-05