Fregene: Simulation of realistic sequence-level data in populations and ascertained samples-Reference-Cited by-同舟云学术

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Fregene: Simulation of realistic sequence-level data in populations and ascertained samples

Published:2008-09-08 Issue:1 Volume:9 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Chadeau-Hyam Marc,Hoggart Clive J,O'Reilly Paul F,Whittaker John C,De Iorio Maria,Balding David J

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/1471-2105-9-364.pdf

Reference12 articles.

1. Hoggart CJ, Chadeau-Hyam M, Clark TG, Lampariello R, De Iorio M, Whittaker JC, Balding DJ: Sequence-level population simulations over large genomic regions. Genetics 2007, 177(3):1725–1731. 10.1534/genetics.106.069088

2. Davies JL, Simancik F, Lyngso R, Mailund T, Hein J: On recombination-induced multiple and simultaneous coalescent events. Genetics 2007, 177(4):2151–2160. 10.1534/genetics.107.071126

3. Hey J: FPG – A computer program for forward population genetic simulation.2004. [ http://lifesci.rutgers.edu/~heylab/heylabsoftware.htm#FPG ]

4. Peng B, Kimmel M: simuPOP: a forward-time population genetics simulation environment. Bioinformatics 2005, 21: 3686–7. 10.1093/bioinformatics/bti584

5. Schaffner S, Foo C, Gabriel S, Reich D, Daly M, Altshuler D: Calibrating a coalescent simulation of human genome sequence variation. Genome Research 2005, 15: 1576–1583. 10.1101/gr.3709305

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