Finding regulatory elements and regulatory motifs: a general probabilistic framework
Author:
Publisher
Springer Science and Business Media LLC
Subject
Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology
Link
http://link.springer.com/content/pdf/10.1186/1471-2105-8-S6-S4.pdf
Reference56 articles.
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2. Roulet E, Busso S, Camargo AA, Simpson AJ, Mermod N, Bucher P: High-throughput SELEX-SAGE method for quantitative modeling of transcription-factor binding sites. Nat Biotechnol. 2002, 20: 831-835.
3. Benos PV, Bulyk ML, Stormo GD: Additivity in protein-DNA interactions: how good an approximation is it?. Nucl acids res. 2002, 30 (20): 4442-4451. 10.1093/nar/gkf578.
4. Djordjevic M, Sengupta AM, Shraiman BI: A Biophysical approach to Transcription Factor Binding Site Discovery. Genome Research. 2003, 13: 2381-2390. 10.1101/gr.1271603.
5. Bintu L, Buchler NE, Garcia HG, Gerland U, Hwa T, Kondev J, Phillips R: Transcriptional regulation by the numbers: models. Curr Opin Genet Dev. 2005, 15 (2): 116-124. 10.1016/j.gde.2005.02.007.
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