Extending the BEAGLE library to a multi-FPGA platform-Reference-Cited by-同舟云学术

Extending the BEAGLE library to a multi-FPGA platform

Published:2013-01-19 Issue:1 Volume:14 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Jin Zheming,Bakos Jason D

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/1471-2105-14-25.pdf

Reference19 articles.

1. Felsenstein J: Inferring Phylogenies. Sunderland, MA: Sinarer Associates, Inc. Publishers; 2004.

2. Ayres DL, Aaron D, Zwick DJ, Peter B, Holder MT, Lewis PO, Huelsenbeck JP, Fredrik R, Swofford DL, Cummings MP, Andrew R, Suchard MA: BEAGLE: an Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics. Syst Biol 2012,61(1):170-173. 10.1093/sysbio/syr100

3. Convey HC-1 family. http://www.conveycomputer.com

4. Mak TST, Lam KP: Embedded Computation of Maximum-Likelihood Phylogeny Inference Using Platform FPGA. Proc. IEEE Computational Systems Bioinformatics Conference table of contents 2004, 512-514.

5. Alachiotis N, Sotiriades E, Dollas A, Stamatakis A: Exploring FPGAs for accelerating the Phylogenetic Likelihood Function. Proc. Eighth IEEE International Workshop on High Performance Computational Biology 2009, 1-8.

Cited by 6 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Efficient Homomorphic Convolution Designs on FPGA for Secure Inference;IEEE Transactions on Very Large Scale Integration (VLSI) Systems;2022-11

2. Scalable Phylogeny Reconstruction with Disaggregated Near-memory Processing;ACM Transactions on Reconfigurable Technology and Systems;2022-09-30

3. MRI-based brain tumor segmentation using FPGA-accelerated neural network;BMC Bioinformatics;2021-09-07

4. Benchmarking 2D/3D/MD-QSAR Models for Imatinib Derivatives: How Far Can We Predict?;Journal of Chemical Information and Modeling;2020-07-05

5. Combined hardware–software multi-parallel prefiltering on the Convey HC-1 for fast homology detection;Parallel Computing;2015-02