Fast and accurate single-cell RNA-seq analysis by clustering of transcript-compatibility counts-Reference-Cited by-同舟云学术

登录注册会员服务联系我们

Fast and accurate single-cell RNA-seq analysis by clustering of transcript-compatibility counts

Published:2016-05-26 Issue:1 Volume:17 Page:
ISSN:1474-760X
Container-title:Genome Biology
language:en
Short-container-title:Genome Biol

Author:

Ntranos Vasilis,Kamath Govinda M.,Zhang Jesse M.,Pachter Lior,Tse David N.

Funder

National Human Genome Research Institute

National Science Foundation

Qualcomm

Publisher

Springer Science and Business Media LLC

Link

http://link.springer.com/content/pdf/10.1186/s13059-016-0970-8.pdf

Reference56 articles.

1. Patel AP, Tirosh I, Trombetta JJ, Shalek AK, Gillespie SM, Wakimoto H, Cahill DP, Nahed BV, Curry WT, Martuza RL, Louis DN, Rozenblatt-Rosen O, Suvà ML, Regev A, Bernstein BE. Single-cell RNA-seq highlights intratumoral heterogeneity in primary glioblastoma. Science. 2014; 344(6190):1396–1401. doi: 10.1126/science.1254257 .

2. Pollen AA, Nowakowski TJ, Chen J, Retallack H, Sandoval-Espinosa C, Nicholas CR, Shuga J, Liu SJ, Oldham MC, Diaz A, Lim DA, Leyrat AA, West JA, Kriegstein AR. Molecular identity of human outer radial glia during cortical development. Cell; 163(1):55–67. doi: 10.1016/j.cell.2015.09.004 .

3. Gaublomme JT, Yosef N, Lee Y, Gertner RS, Yang LV, Wu C, Pandolfi PP, Mak T, Satija R, Shalek AK, Kuchroo VK, Park H, Regev A. Single-cell genomics unveils critical regulators of Th17 cell pathogenicity. Cell; 163(6):1400–12. doi: 10.1016/j.cell.2015.11.009 .

4. Kowalczyk MS, Tirosh I, Heckl D, Rao TN, Dixit A, Haas BJ, Schneider RK, Wagers AJ, Ebert BL, Regev A. Single-cell RNA-seq reveals changes in cell cycle and differentiation programs upon aging of hematopoietic stem cells. Genome Res. 2015; 25(12):1860–1872. doi: 10.1101/gr.192237.115 . http://genome.cshlp.org/content/25/12/1860.full.pdf+html .

5. Lande-Diner L, Stewart-Ornstein J, Weitz CJ, Lahav G. Single-cell analysis of circadian dynamics in tissue explants. Mol Biol Cell. 2015; 26(22):3940–945. doi: 10.1091/mbc.E15-06-0403 .

Cited by 104 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Accurate long-read transcript discovery and quantification at single-cell, pseudo-bulk and bulk resolution with Isosceles;Nature Communications;2024-08-25

2. USP18modulates lupus risk via negative regulation of interferon response;2024-07-16

3. Sox9 regulates alternative splicing and pancreatic beta cell function;Nature Communications;2024-01-18

4. An Efficient Clustering Algorithm on Next-Generation Sequence Data;Lecture Notes in Networks and Systems;2024

5. Accurate long-read transcript discovery and quantification at single-cell resolution with Isosceles;2023-12-01

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号京ICP备18003416号-3