Ligation-free ribosome profiling of cell type-specific translation in the brain-Reference-Cited by-同舟云学术

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Ligation-free ribosome profiling of cell type-specific translation in the brain

Published:2016-07-05 Issue:1 Volume:17 Page:
ISSN:1474-760X
Container-title:Genome Biology
language:en
Short-container-title:Genome Biol

Author:

Hornstein Nicholas,Torres Daniela,Das Sharma Sohani,Tang Guomei,Canoll Peter,Sims Peter A.

Funder

National Institute of Neurological Disorders and Stroke

National Cancer Institute

National Institute of Mental Health

National Institute of Biomedical Imaging and Bioengineering

Congressionally Directed Medical Research Programs

Simons Foundation

Publisher

Springer Science and Business Media LLC

Link

http://link.springer.com/content/pdf/10.1186/s13059-016-1005-1.pdf

Reference39 articles.

1. Ingolia NT, Ghaemmaghami S, Newman JR, Weissman JS. Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling. Science. 2009;324(5924):218–23.

2. Ingolia NT, Lareau LF, Weissman JS. Ribosome profiling of mouse embryonic stem cells reveals the complexity and dynamics of mammalian proteomes. Cell. 2011;147:789–802.

3. Brar GA, Yassour M, Friedman N, Regev A, Ingolia NT, Weissman JS. High-resolution view of the yeast meiotic program revealed by ribosome profiling. Science. 2012;335(6068):552–7.

4. Calviello L, Mukherjee N, Wyler E, Zauber H, Hirsekorn A, Selbach M, Landthaler M, Obermayer B, Ohler U. Detecting actively translated open reading frames in ribosome profiling data. Nat Methods. 2016;13(2):165–70.

5. Lareau LF, Hite DH, Hogan GJ, Brown PO. Distinct stages of the translation elongation cycle revealed by sequencing ribosome-protected mRNA fragments. Elife. 2014;3:e01257.

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