Author:
Alkaoud Ahmed M.,Alakhras Abbas I.,Ibrahim Moez A.,Alghamdi S. K.,Hussein Rageh K.
Abstract
AbstractThe present study investigates the potential of a new compound containing sulfonamide and 4(3H)-quinazolinone to inhibit the hCA-IIX enzyme using in silico methods. Density functional theory-based calculations of electronic properties have been addressed through the analysis of frontier molecular orbitals, molecule electrostatic potential, and IR and UV–vis spectroscopy data. A molecular electrostatic potential analysis predicts that the target protein will be most inhibited by the sulfonamide groups since it has the highest potential spots for electrophile and nucleophile attack. The investigated compound exhibited good ADMET properties and satisfied the Lipinski rule of drug likeness. The hCA-IIX protein binding affinity with the proposed compound was determined by molecular docking analysis, which revealed a stable conformation with more negative binding energy (−12.19 kcal/mol) than the standard AZA drug (−7.36 kcal/mol). Moreover, a molecular dynamics study confirmed the docking results through trajectory analysis. The RMSD and RMSF both showed convergence and no significant fluctuations during the simulation time, which revealed a stable interaction within the active domain of the target protein. According to these findings, the proposed compound has a good pharmacological nature and could potentially be an efficient drug against hCAIX enzymes.
Funder
Deanship of Scientific Research at Imam Mohammad Ibn Saud Islamic University
Publisher
Springer Science and Business Media LLC
Reference40 articles.
1. Hu T, Zhang J, Wang J, Sha L, Xia Y, Ortyl TC, et al. Advances in epilepsy: mechanisms, clinical trials, and drug therapies. J Med Chem. 2023;66:4434–67.
2. De Luca L, Angeli A, Ricci F, Supuran CT, Gitto R. Structure-guided identification of a selective sulfonamide-based inhibitor targeting the human carbonic anhydrase VA isoform. Arch Pharm (Weinheim). 2023;356:2200383.
3. Poggetti V, Salerno S, Baglini E, Barresi E, Da Settimo F, Taliani S. Carbonic anhydrase activators for neurodegeneration: an overview. Molecules. 2022;27:2544.
4. Syrjänen L, Tolvanen M, Hilvo M, Olatubosun A, Innocenti A, Scozzafava A, et al. Characterization of the first beta-class carbonic anhydrase from an arthropod (Drosophila melanogaster) and phylogenetic analysis of beta-class carbonic anhydrases in invertebrates. BMC Biochem. 2010;11:28.
5. Nerella SG, Thacker PS, Arifuddin M, Supuran CT. Tumor associated carbonic anhydrase inhibitors: rational approaches, design strategies, structure activity relationship and mechanistic insights. Eur J Med Chem Rep. 2024;10:100131.