cytoHubba: identifying hub objects and sub-networks from complex interactome-Reference-Cited by-同舟云学术

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cytoHubba: identifying hub objects and sub-networks from complex interactome

Published:2014-12 Issue:S4 Volume:8 Page:
ISSN:1752-0509
Container-title:BMC Systems Biology
language:en
Short-container-title:BMC Syst Biol

Author:

Chin Chia-Hao,Chen Shu-Hwa,Wu Hsin-Hung,Ho Chin-Wen,Ko Ming-Tat,Lin Chung-Yen

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Modelling and Simulation,Structural Biology

Link

https://link.springer.com/content/pdf/10.1186/1752-0509-8-S4-S11.pdf

Reference20 articles.

1. Jeong H, Mason SP, Barabasi AL, Oltvai ZN: Lethality and centrality in protein networks. Nature. 2001, 411: 41-42. 10.1038/35075138.

2. Shannon P, Markiel A, Ozier O, Baliga NS, Wang JT, Ramage D, Amin N, Schwikowski B, Ideker T: Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res. 2003, 13: 2498-2504. 10.1101/gr.1239303.

3. Assenov Y, Ramirez F, Schelhorn SE, Lengauer T, Albrecht M: Computing topological parameters of biological networks. Bioinformatics. 2008, 24: 282-284. 10.1093/bioinformatics/btm554.

4. Scardoni G, Petterlini M, Laudanna C: Analyzing biological network parameters with CentiScaPe. Bioinformatics. 2009, 25: 2857-2859. 10.1093/bioinformatics/btp517.

5. ShortestPath plugin. [http://csresources.sourceforge.net/ShortestPath/]

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