Development of SNP genotyping assays for heading date in rice
Author:
Affiliation:
1. Institute of Crop Science, National Agriculture and Food Research Organization (NARO)
2. Institute of Agrobiological Sciences, NARO
3. Genetic Resources Center, NARO
Publisher
Japanese Society of Breeding
Link
https://www.jstage.jst.go.jp/article/jsbbs/74/3/74_23093/_pdf
Reference76 articles.
1. Alexandrov, N., S. Tai, W. Wang, L. Mansueto, K. Palis, R.R. Fuentes, V.J. Ulat, D. Chebotarov, G. Zhang, Z. Li et al. (2015) SNP-Seek database of SNPs derived from 3000 rice genomes. Nucleic Acids Res 43: D1023–1027.
2. Broman, K.W., H. Wu, S. Sen and G.A. Churchill (2003) R/qtl: QTL mapping in experimental crosses. Bioinformatics 19: 889–890.
3. Chen, L., Z. Zhong, W. Wu, L. Liu, G. Lu, M. Jin, J. Tan, P. Sheng, D. Wang and J. Wang (2015) Fine mapping of DTH3b, a minor heading date QTL potentially functioning upstream of Hd3a and RFT1 under long-day conditions in rice. Mol Breed 35: 206.
4. Chigira, K., N. Kojima, M. Yamasaki, K. Yano, S. Adachi, T. Nomura, M. Jiang, K. Katsura and T. Ookawa (2020) Landraces of temperate japonica rice have superior alleles for improving culm strength associated with lodging resistance. Sci Rep 10: 19855.
5. Doi, K., T. Izawa, T. Fuse, U. Yamanouchi, T. Kubo, Z. Shimatani, M. Yano and A. Yoshimura (2004) Ehd1, a B-type response regulator in rice, confers short-day promotion of flowering and controls FT-like gene expression independently of Hd1. Genes Dev 18: 926–936.
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