DNA sensor-associated type I interferon signaling is increased in ulcerative colitis and induces JAK-dependent inflammatory cell death in colonic organoids

Author:

Flood Peter1,Fanning Aine1,Woznicki Jerzy A.1,Crowley Tadhg1,Christopher Andrea1,Vaccaro Alessandra1ORCID,Houston Aileen12,McSweeney Sheila1,Ross Sarah1,Hogan Aileen1,Brint Elizabeth13,Skowyra Agnieszka1,Bustamante Milan1,Ambrose Monica1,Moloney Gerard1ORCID,MacSharry John145,Hammarström Marie-Louise6,Hurley Margot12,Fitzgibbons Christine1,Quigley Eamonn M. M.1,Shanahan Fergus12,Zulquernain Syed A.12,McCarthy Jane7,Dodson G. Steven8,Dabbagh Karim8,McRae Bradford L.9,Melgar Silvia1,Nally Ken110ORCID

Affiliation:

1. APC Microbiome Ireland, University College Cork, Cork, Ireland

2. Department of Medicine, University College Cork, Cork, Ireland

3. Department of Pathology, Cork University Hospital, University College Cork, Clinical Sciences Building, Cork, Ireland

4. School of Microbiology, University College Cork, Cork, Ireland

5. School of Medicine, University College Cork, Cork, Ireland

6. Section of Infection and Immunology, Department of Clinical Microbiology, Umeå University, Umeå, Sweden

7. Department of Gastroenterology, Mercy University Hospital, Cork, Ireland

8. Second Genome, Brisbane, California

9. Immunology Discovery, Abbvie Bioresearch Center, Worcester, Massachusetts

10. School of Biochemistry and Cell Biology, University College Cork, Cork, Ireland

Abstract

This study found that patients with active UC have significantly increased colonic gene expression of cytosolic DNA sensor, inflammasome, STING, and type I IFN signaling pathways. The type I IFN, IFN-β, in combination with TNF-α induced JAK-dependent but NLRP3 and inflammasome-independent inflammatory cell death of colonic organoids. This novel inflammatory cell death phenotype is relevant to UC immunopathology and may partially explain the efficacy of the JAKinibs tofacitinib and upadacitinib in patients with UC.

Funder

Science Foundation Ireland

Publisher

American Physiological Society

Subject

Physiology (medical),Gastroenterology,Hepatology,Physiology

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