Ecological and morphological differentiation among COI haplotype groups in the plant parasitic nematode species Mesocriconema xenoplax
Author:
Matczyszyn Julianne N.1, Harris Timothy1, Powers Kirsten1, Everhart Sydney E.2, Powers Thomas O.1
Affiliation:
1. Department of Plant Pathology , University of Nebraska-Lincoln , Lincoln , NE , 2. Department of Plant Science and Landscape Architecture , University of Connecticut , Storrs , CT
Abstract
Abstract
DNA barcoding with the mitochondrial COI gene reveals distinct haplotype subgroups within the monophyletic and parthenogenetic nematode species, Mesocriconema xenoplax. Biological attributes of these haplotype groups (HG) have not been explored. An analysis of M. xenoplax from 40 North American sites representing both native plant communities and agroecosystems was conducted to identify possible subgroup associations with ecological, physiological, or geographic factors. A dataset of 132 M. xenoplax specimens was used to generate sequences of a 712 bp region of the cytochrome oxidase subunit I gene. Maximum-likelihood and Bayesian phylogenies recognized seven COI HG (≥99/0.99 posterior probability/bootstrap value). Species delimitation metrics largely supported the genetic integrity of the HG. Discriminant function analysis of HG morphological traits identified stylet length, total body length, and stylet knob width as the strongest distinguishing features among the seven groups, with stylet length as the strongest single distinguishing morphological feature. Multivariate analysis identified land cover, ecoregion, and maximum temperature as predictors of 53.6% of the total variation (P = 0.001). Within land cover, HG categorized under “herbaceous,” “woody wetlands,” and “deciduous forest” were distinct in DAPC and RDA analyses and were significantly different (analysis of molecular variance P = 0.001). These results provide empirical evidence for molecular, morphological, and ecological differentiation associated with HG within the monophyletic clade that represents the species Mesocriconema xenoplax.
Publisher
Walter de Gruyter GmbH
Reference82 articles.
1. Akaike, H. 1998. Information theory and an extension of the maximum likelihood principle. Pp.199–213 in. E. Parzen, K. Tanabe, G. Kitagawa, Eds Perspective in statistics: Selected papers of Hirotugu Akaike. New York: Springer. 2. Andújar, C., Arribas, P., Yu, D. W., Vogler, A. P., and Emerson, B. C. 2018. Why the COI barcode should be the community DNA metabarcode for the metazoa. Molecular Ecology 27:3968–3975. doi:
10.1111/mec.14844. 3. Avó, A. P., Daniell, T. J., Neilson, R., Oliveira, S., Branco, J., and Adão, H. 2017. DNA barcoding and morphological identification of benthic nematodes assemblages of estuarine intertidal sediments: Advances in molecular tools for biodiversity assessment. Frontiers in Marine Science 4:66. 4. Bai, M., Qing, X., Qiao, K., Ning, X., Xiao, S., Cheng, X., and Liu, G. 2020. Mitochondrial COI gene is valid to delimitate Tylenchidae (Nematoda: Tylenchomorpha) species. Journal of Nematology 52:1–12. 5. Barbercheck, M., Neher, D., Anas, O., El-Allaf, S., and Weicht, T. 2009. Response of soil invertebrates to disturbance across three resource regions in North Carolina. Environmental Monitoring and Assessment 152:283–298.
Cited by
1 articles.
订阅此论文施引文献
订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献
|
|