Statistical methods for detecting latent periodicity patterns in biological sequences: The case of small-size samples-Reference-Cited by-同舟云学术

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Statistical methods for detecting latent periodicity patterns in biological sequences: The case of small-size samples

Published:2009-06 Issue:2 Volume:19 Page:358-367
ISSN:1054-6618
Container-title:Pattern Recognition and Image Analysis
language:en
Short-container-title:Pattern Recognit. Image Anal.

Author:

Chaley M. B.,Nazipova N. N.,Kutyrkin V. A.

Publisher

Pleiades Publishing Ltd

Subject

Computer Graphics and Computer-Aided Design,Computer Vision and Pattern Recognition

Link

http://link.springer.com/content/pdf/10.1134/S1054661809020217.pdf

Reference30 articles.

1. G. Benson, “Tandem Repeats Finder: A Program to Analyze DNA Sequences,” Nucl. Acids Res. 27, 573 (1999).

2. G. Benson, “A New Distance Measure for Comparing Sequence Profiles Based on Path Length along an Entropy Surface,” Bioinformatics 18, S44 (2002).

3. R. Kolpakov, G. Bana, and G. Kucherov, “MREPS: Efficient and Flexible Detection of Tandem Repeats in DNA,” Nucl. Acids Res. 31, 3672 (2003).

4. V. Boeva, M. Regnier, D. Papatsenko, et al., “Short Fuzzy Tandem Repeats in Genomic Sequences, Identification, and Possible Role in Regulation of Gene Expression,” Bioinformatics 22, 676 (2004).

5. F. Denoeud and G. Vergnaud, “Identification of Polymorphic Tandem Repeats by Direct Comparison of Genome Sequence from Different Bacterial Strains: A Web-Based Resource,” BMC Bioinformatics 5, 4 (2004).

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1. The IMPB RAS is 50 years old. Bioinformatics Laboratory;Proceedings of the International Conference "Mathematical Biology and Bioinformatics";2022-10-27

2. Detection in the Genomes of Higher Organisms of Highly Fuzzy Megasatellite Repeats;Proceedings of the International Conference "Mathematical Biology and Bioinformatics";2020-11-01

3. HeteroGenome: database of genome periodicity;Database;2014-05-24

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