The NCI Genomic Data Commons as an engine for precision medicine

Author:

Jensen Mark A.1ORCID,Ferretti Vincent2,Grossman Robert L.3ORCID,Staudt Louis M.4

Affiliation:

1. Leidos Biomedical Research, Inc., Frederick, MD;

2. Ontario Institute for Cancer Research, Toronto, ON, Canada;

3. Center for Data Intensive Science, University of Chicago, Chicago IL; and

4. Center for Cancer Genomics, National Cancer Institute, National Institutes of Health, Bethesda, MD

Abstract

Abstract The National Cancer Institute Genomic Data Commons (GDC) is an information system for storing, analyzing, and sharing genomic and clinical data from patients with cancer. The recent high-throughput sequencing of cancer genomes and transcriptomes has produced a big data problem that precludes many cancer biologists and oncologists from gleaning knowledge from these data regarding the nature of malignant processes and the relationship between tumor genomic profiles and treatment response. The GDC aims to democratize access to cancer genomic data and to foster the sharing of these data to promote precision medicine approaches to the diagnosis and treatment of cancer.

Publisher

American Society of Hematology

Subject

Cell Biology,Hematology,Immunology,Biochemistry

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4. Enasidenib (AG-221), a potent oral inhibitor of mutant isocitrate dehydrogenase 2 (IDH2) enzyme, induces hematologic responses in patients with myelodysplastic syndromes (MDS) [abstract];Stein;Blood,2016

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