Cell of origin strongly influences genetic selection in a mouse model of T-ALL

Author:

Berquam-Vrieze Katherine E.1,Nannapaneni Kishore2,Brett Benjamin T.2,Holmfeldt Linda3,Ma Jing4,Zagorodna Oksana5,Jenkins Nancy A.6,Copeland Neal G.6,Meyerholz David K.5,Knudson C. Michael5,Mullighan Charles G.3,Scheetz Todd E.27,Dupuy Adam J.1

Affiliation:

1. Department of Anatomy and Cell Biology and

2. Center for Bioinformatics, Computational Biology and Biomedical Engineering, Roy J. and Lucille A. Carver College of Medicine, University of Iowa, Iowa City, IA;

3. Department of Pathology and

4. Hartwell Center for Bioinformatics and Biotechnology, St Jude Children's Research Hospital, Memphis, TN;

5. Department of Pathology, Roy J. and Lucille A. Carver College of Medicine, University of Iowa, Iowa City, IA;

6. Institute of Molecular and Cell Biology, Proteos, Singapore; and

7. Ophthalmology and Visual Sciences, Roy J. and Lucille A. Carver College of Medicine, University of Iowa, Iowa City, IA

Abstract

Abstract Identifying the normal cell from which a tumor originates is crucial to understanding the etiology of that cancer. However, retrospective identification of the cell of origin in cancer is challenging because of the accumulation of genetic and epigenetic changes in tumor cells. The biologic state of the cell of origin likely influences the genetic events that drive transformation. We directly tested this hypothesis by performing a Sleeping Beauty transposon mutagenesis screen in which common insertion sites were identified in tumors that were produced by mutagenesis of cells at varying time points throughout the T lineage. Mutation and gene expression data derived from these tumors were then compared with data obtained from a panel of 84 human T-cell acute lymphoblastic leukemia samples, including copy number alterations and gene expression profiles. This revealed that altering the cell of origin produces tumors that model distinct subtypes of human T-cell acute lymphoblastic leukemia, suggesting that even subtle changes in the cell of origin dramatically affect genetic selection in tumors. These findings have broad implications for the genetic analysis of human cancers as well as the production of mouse models of cancer.

Publisher

American Society of Hematology

Subject

Cell Biology,Hematology,Immunology,Biochemistry

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