NSD2 drives t(4;14) myeloma cell dependence on adenylate kinase 2 by diverting one-carbon metabolism to the epigenome

Author:

Sobh Amin1ORCID,Encinas Elena1,Patel Alisha1ORCID,Surapaneni Greeshma1,Bonilla Emilie1,Kaestner Charlotte1,Poullard Janai1,Clerio Monica1,Vasan Karthik2,Freeman Tzipporah3,Lv Dongwen4ORCID,Dupéré-Richer Daphné1,Riva Alberto5ORCID,Barwick Benjamin G.6ORCID,Zhou Daohong4,Boise Lawrence H.6ORCID,Mitsiades Constantine S.7,Kim Baek3,Bennett Richard L.1,Chandel Navdeep S.2,Licht Jonathan D.1ORCID

Affiliation:

1. 1Division of Hematology/Oncology, University of Florida Health Cancer Center, University of Florida, Gainesville, FL

2. 2Department of Medicine, Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, IL

3. 3Center for ViroScience and Cure, Department of Pediatrics, Emory University School of Medicine, Atlanta, GA

4. 4Department of Biochemistry and Structural Biology, The University of Texas Health Science Center San Antonio, San Antonio, TX

5. 5Interdisciplinary Center for Biotechnology Research, The University of Florida, Gainesville, FL

6. 6Department of Hematology and Medical Oncology, Winship Cancer Institute, Emory University School of Medicine, Atlanta, GA

7. 7Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA

Abstract

Abstract Chromosomal translocation (4;14), an adverse prognostic factor in multiple myeloma (MM), drives overexpression of the histone methyltransferase nuclear receptor binding SET domain protein 2 (NSD2). A genome-wide CRISPR screen in MM cells identified adenylate kinase 2 (AK2), an enzyme critical for high-energy phosphate transfer from the mitochondria, as an NSD2-driven vulnerability. AK2 suppression in t(4;14) MM cells decreased nicotinamide adenine dinucleotide phosphate (NADP[H]) critical for conversion of ribonucleotides to deoxyribonucleosides, leading to replication stress, DNA damage, and apoptosis. Driving a large genome-wide increase in chromatin methylation, NSD2 overexpression depletes S-adenosylmethionine, compromising the synthesis of creatine from its precursor, guanidinoacetate. Creatine supplementation restored NADP(H) levels, reduced DNA damage, and rescued AK2-deficient t(4;14) MM cells. As the creatine phosphate shuttle constitutes an alternative means for mitochondrial high-energy phosphate transport, these results indicate that NSD2-driven creatine depletion underlies the hypersensitivity of t(4;14) MM cells to AK2 loss. Furthermore, AK2 depletion in t(4;14) cells impaired protein folding in the endoplasmic reticulum, consistent with impaired use of mitochondrial adenosine triphosphate (ATP). Accordingly, AK2 suppression increased the sensitivity of MM cells to proteasome inhibition. These findings delineate a novel mechanism in which aberrant transfer of carbon to the epigenome creates a metabolic vulnerability, with direct therapeutic implications for t(4;14) MM.

Publisher

American Society of Hematology

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